Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Alx1Q8C8B0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Alx1Q8C8B0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Gm5455-201ENSMUST00000058710 715 ntBASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Alx1Q8C8B0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm5616-201ENSMUST00000165252 384 ntBASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm8741-201ENSMUST00000174736 384 ntBASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm5706-201ENSMUST00000181525 993 ntBASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Alx1Q8C8B0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Gm7003-201ENSMUST00000195089 312 ntBASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Gm44262-201ENSMUST00000204969 372 ntBASIC14.37□□□□□ -0.11
Alx1Q8C8B0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Alx1Q8C8B0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms