Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Gm8738-201ENSMUST00000172606 329 ntBASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Gm26035-201ENSMUST00000083065 308 ntBASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Gm18222-201ENSMUST00000202416 1387 ntBASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4Q8BQZ5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm6023-201ENSMUST00000118217 606 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm43179-201ENSMUST00000198797 275 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm44124-201ENSMUST00000204159 472 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr284-202ENSMUST00000206647 966 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr582-201ENSMUST00000098212 960 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms