Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zfp125-201ENSMUST00000079237 2488 ntBASIC17.27■□□□□ 0.36
Usp54Q8BL06 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp54Q8BL06 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Gm6450-201ENSMUST00000200896 574 ntBASIC17.27■□□□□ 0.35
Usp54Q8BL06 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.27■□□□□ 0.35
Usp54Q8BL06 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp54Q8BL06 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Usp54Q8BL06 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Map1b-203ENSMUST00000223725 2669 ntBASIC17.26■□□□□ 0.35
Usp54Q8BL06 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Gm14219-201ENSMUST00000120414 288 ntBASIC17.26■□□□□ 0.35
Usp54Q8BL06 Gm8574-201ENSMUST00000203207 924 ntBASIC17.26■□□□□ 0.35
Usp54Q8BL06 Gm45594-201ENSMUST00000211717 241 ntBASIC17.26■□□□□ 0.35
Usp54Q8BL06 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp54Q8BL06 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.25■□□□□ 0.35
Usp54Q8BL06 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp54Q8BL06 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp54Q8BL06 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Gm10807-201ENSMUST00000177134 795 ntBASIC17.24■□□□□ 0.35
Usp54Q8BL06 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.24■□□□□ 0.35
Usp54Q8BL06 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp54Q8BL06 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp54Q8BL06 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms