Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm14644-201ENSMUST00000116671 647 ntBASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm11331-201ENSMUST00000119764 288 ntBASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm12266-201ENSMUST00000120311 962 ntBASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm17040-202ENSMUST00000170597 889 ntBASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm43947-201ENSMUST00000203019 959 ntBASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp1Q8BJQ2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Gm9230-201ENSMUST00000188228 532 ntBASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp1Q8BJQ2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Gm8959-201ENSMUST00000213150 571 ntBASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp1Q8BJQ2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms