Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm24231-201ENSMUST00000104315 133 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Mir1894-201ENSMUST00000122802 81 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp2bQ8BJF9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2bQ8BJF9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Gm7063-201ENSMUST00000186840 981 ntBASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2bQ8BJF9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms