Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm27847-201ENSMUST00000183711 107 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm27375-201ENSMUST00000183799 107 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf38Q8BI21 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm8602-201ENSMUST00000184045 607 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm7561-201ENSMUST00000211203 886 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm29705-201ENSMUST00000212598 474 ntBASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf38Q8BI21 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf38Q8BI21 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf38Q8BI21 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms