Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Olfr582-201ENSMUST00000098212 960 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.26□□□□□ -0.45
Ubp1Q811S7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm2991-201ENSMUST00000173338 480 ntBASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.26□□□□□ -0.45
Ubp1Q811S7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.26□□□□□ -0.45
Ubp1Q811S7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubp1Q811S7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm15198-201ENSMUST00000117283 177 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm9022-201ENSMUST00000182482 992 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.25□□□□□ -0.45
Ubp1Q811S7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.25□□□□□ -0.45
Ubp1Q811S7 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms