Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Gm11667-201ENSMUST00000119828 486 ntBASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Gm10179-201ENSMUST00000086233 688 ntBASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Usp6nlQ80XC3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm8566-201ENSMUST00000120174 465 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm14665-201ENSMUST00000122294 557 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm37246-201ENSMUST00000192665 835 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm1821-202ENSMUST00000227415 750 ntBASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Usp6nlQ80XC3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gm3332-201ENSMUST00000189337 928 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 Gm26448-201ENSMUST00000082446 203 ntBASIC13.65□□□□□ -0.22
Usp6nlQ80XC3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms