Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Map1b-203ENSMUST00000223725 2669 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.44□□□□□ -0.42
Usp8Q80U87 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.44□□□□□ -0.42
Usp8Q80U87 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.44□□□□□ -0.42
Usp8Q80U87 Gm7561-201ENSMUST00000211203 886 ntBASIC12.44□□□□□ -0.42
Usp8Q80U87 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp8Q80U87 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp8Q80U87 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm12363-201ENSMUST00000122250 668 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm7029-201ENSMUST00000173226 450 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm7653-201ENSMUST00000214567 508 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gm26035-201ENSMUST00000083065 308 ntBASIC12.43□□□□□ -0.42
Usp8Q80U87 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp8Q80U87 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp8Q80U87 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms