Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.18□□□□□ -0.46
Pcdh19Q80TF3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm44262-201ENSMUST00000204969 372 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.17□□□□□ -0.46
Pcdh19Q80TF3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms