Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm44262-201ENSMUST00000204969 372 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh8Q7TSK3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh8Q7TSK3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh8Q7TSK3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms