Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubfd1Q78JW9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubfd1Q78JW9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ubfd1Q78JW9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ubfd1Q78JW9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.08□□□□□ -0.48
Ubfd1Q78JW9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Gm7857-201ENSMUST00000117957 358 ntBASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Gm14208-201ENSMUST00000119645 678 ntBASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubfd1Q78JW9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm11989-201ENSMUST00000117240 672 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm11362-201ENSMUST00000118838 850 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm29615-201ENSMUST00000185371 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28224-201ENSMUST00000186078 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm29001-201ENSMUST00000186177 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28292-201ENSMUST00000186593 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28101-201ENSMUST00000187608 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm29076-201ENSMUST00000187689 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28302-201ENSMUST00000187931 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28646-201ENSMUST00000188220 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28205-201ENSMUST00000189177 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm29032-201ENSMUST00000189797 697 ntBASIC12.06□□□□□ -0.48
Ubfd1Q78JW9 Gm28695-201ENSMUST00000190300 697 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms