Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Timd4Q6U7R4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm42599-201ENSMUST00000201308 469 ntBASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm3961-201ENSMUST00000204425 994 ntBASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm7783-201ENSMUST00000204795 781 ntBASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Timd4Q6U7R4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm22323-201ENSMUST00000103832 109 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm24255-201ENSMUST00000104481 128 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm11222-201ENSMUST00000119005 738 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm9083-201ENSMUST00000120423 819 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm13350-201ENSMUST00000120519 479 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm13570-201ENSMUST00000140763 309 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm38241-201ENSMUST00000192641 898 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm37259-201ENSMUST00000193903 849 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Timd4Q6U7R4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms