Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm12363-201ENSMUST00000122250 668 ntBASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm25927-201ENSMUST00000175058 117 ntBASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm27701-201ENSMUST00000184498 110 ntBASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scaf4Q6PFF0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm12203-201ENSMUST00000118235 598 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm15920-201ENSMUST00000118998 402 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm12209-201ENSMUST00000120089 596 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm28911-201ENSMUST00000188837 117 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm4768-201ENSMUST00000206199 686 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gm10146-201ENSMUST00000072739 309 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Cog3-203ENSMUST00000227473 4197 ntBASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.18□□□□□ -0.46
Scaf4Q6PFF0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scaf4Q6PFF0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms