Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm9884-201ENSMUST00000194343 1222 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gm18561-201ENSMUST00000206027 804 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 AC154361.2-201ENSMUST00000224747 943 ntBASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Smarca2Q6DIC0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Gm5555-201ENSMUST00000120352 1111 ntBASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Gm5870-201ENSMUST00000196461 282 ntBASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarca2Q6DIC0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Gm42816-201ENSMUST00000198433 325 ntBASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 AC134869.4-202ENSMUST00000224350 837 ntBASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Gm8899-201ENSMUST00000214635 1332 ntBASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smarca2Q6DIC0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm18983-201ENSMUST00000222884 2729 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Mir181d-201ENSMUST00000102383 72 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm7719-201ENSMUST00000182374 975 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm29763-201ENSMUST00000205306 616 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm39288-201ENSMUST00000210554 446 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Gm45199-201ENSMUST00000207640 1507 ntBASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smarca2Q6DIC0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm6114-201ENSMUST00000182472 968 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Mir8093-201ENSMUST00000185043 137 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm8197-202ENSMUST00000193422 934 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm6390-201ENSMUST00000215034 589 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 AC114645.1-201ENSMUST00000215831 187 ntBASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smarca2Q6DIC0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms