Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.42□□□□□ -0.9
Zfp248Q640N4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.42□□□□□ -0.9
Zfp248Q640N4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Zfp248Q640N4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm4984-201ENSMUST00000115987 360 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm27390-201ENSMUST00000184516 176 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm5904-201ENSMUST00000210286 865 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Zfp248Q640N4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.4□□□□□ -0.9
Zfp248Q640N4 Gm11964-201ENSMUST00000120982 444 ntBASIC9.4□□□□□ -0.9
Zfp248Q640N4 Gm1335-201ENSMUST00000121653 386 ntBASIC9.4□□□□□ -0.9
Zfp248Q640N4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 1572.7 ms