Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 AC164099.1-201ENSMUST00000227780 333 ntBASIC16.22■□□□□ 0.19
Gli3Q61602 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gli3Q61602 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gli3Q61602 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gli3Q61602 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 AC154354.1-203ENSMUST00000225565 1364 ntBASIC16.22■□□□□ 0.19
Gli3Q61602 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gli3Q61602 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC16.22■□□□□ 0.19
Gli3Q61602 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gli3Q61602 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC16.21■□□□□ 0.19
Gli3Q61602 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC16.21■□□□□ 0.19
Gli3Q61602 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC16.21■□□□□ 0.19
Gli3Q61602 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC16.21■□□□□ 0.19
Gli3Q61602 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC16.21■□□□□ 0.19
Gli3Q61602 Gm6216-201ENSMUST00000182390 687 ntBASIC16.21■□□□□ 0.19
Gli3Q61602 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC16.21■□□□□ 0.19
Gli3Q61602 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.21■□□□□ 0.19
Gli3Q61602 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Gli3Q61602 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gli3Q61602 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gli3Q61602 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
Gli3Q61602 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Gli3Q61602 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC16.21■□□□□ 0.18
Gli3Q61602 Gm5706-201ENSMUST00000181525 993 ntBASIC16.21■□□□□ 0.18
Gli3Q61602 Gm43966-201ENSMUST00000203301 612 ntBASIC16.21■□□□□ 0.18
Gli3Q61602 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC16.21■□□□□ 0.18
Gli3Q61602 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gli3Q61602 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gli3Q61602 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gli3Q61602 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Gli3Q61602 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Gli3Q61602 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gli3Q61602 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm15519-201ENSMUST00000120088 1566 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gli3Q61602 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC16.2■□□□□ 0.18
Gli3Q61602 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm15625-201ENSMUST00000117617 1093 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Gm25492-201ENSMUST00000157383 129 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC16.2■□□□□ 0.18
Gli3Q61602 Gm44814-201ENSMUST00000207018 434 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Gm4978-201ENSMUST00000071565 801 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 n-R5s71-201ENSMUST00000093668 119 ntBASIC16.2■□□□□ 0.18
Gli3Q61602 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gli3Q61602 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gli3Q61602 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.19■□□□□ 0.18
Gli3Q61602 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gli3Q61602 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC16.19■□□□□ 0.18
Gli3Q61602 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gli3Q61602 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC16.19■□□□□ 0.18
Gli3Q61602 Gm15197-201ENSMUST00000120526 478 ntBASIC16.19■□□□□ 0.18
Gli3Q61602 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC16.19■□□□□ 0.18
Gli3Q61602 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC16.19■□□□□ 0.18
Gli3Q61602 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms