Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ift88Q61371 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ift88Q61371 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ift88Q61371 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ift88Q61371 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ift88Q61371 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.67□□□□□ -0.22
Ift88Q61371 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.67□□□□□ -0.22
Ift88Q61371 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm27847-201ENSMUST00000183711 107 ntBASIC13.67□□□□□ -0.22
Ift88Q61371 Gm27375-201ENSMUST00000183799 107 ntBASIC13.67□□□□□ -0.22
Ift88Q61371 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.67□□□□□ -0.22
Ift88Q61371 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.67□□□□□ -0.22
Ift88Q61371 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ift88Q61371 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ift88Q61371 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ift88Q61371 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ift88Q61371 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.66□□□□□ -0.22
Ift88Q61371 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ift88Q61371 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.66□□□□□ -0.22
Ift88Q61371 Gm15806-201ENSMUST00000120696 955 ntBASIC13.66□□□□□ -0.22
Ift88Q61371 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.66□□□□□ -0.22
Ift88Q61371 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ift88Q61371 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.66□□□□□ -0.22
Ift88Q61371 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ift88Q61371 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ift88Q61371 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.66□□□□□ -0.22
Ift88Q61371 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ift88Q61371 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ift88Q61371 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Gm13315-201ENSMUST00000120376 991 ntBASIC13.65□□□□□ -0.22
Ift88Q61371 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.65□□□□□ -0.22
Ift88Q61371 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.65□□□□□ -0.22
Ift88Q61371 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.65□□□□□ -0.22
Ift88Q61371 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ift88Q61371 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.65□□□□□ -0.22
Ift88Q61371 Gm4034-201ENSMUST00000187674 480 ntBASIC13.65□□□□□ -0.22
Ift88Q61371 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.65□□□□□ -0.22
Ift88Q61371 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.65□□□□□ -0.22
Ift88Q61371 Gm6007-201ENSMUST00000208170 823 ntBASIC13.65□□□□□ -0.22
Ift88Q61371 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms