Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rprl1-202ENSMUST00000198476 238 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm45186-201ENSMUST00000206874 478 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm44651-201ENSMUST00000207343 372 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm15236-201ENSMUST00000117309 379 ntBASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm2383-201ENSMUST00000181461 807 ntBASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm45598-202ENSMUST00000210719 986 ntBASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.82□□□□□ -0.04
Vps54Q5SPW0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.81□□□□□ -0.04
Vps54Q5SPW0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Gm26361-201ENSMUST00000158868 186 ntBASIC14.81□□□□□ -0.04
Vps54Q5SPW0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Gm44882-201ENSMUST00000205702 802 ntBASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms