Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Gm18463-201ENSMUST00000207258 474 ntBASIC21.5■■□□□ 1.03
Trim41Q5NCC3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim41Q5NCC3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Mir680-2-201ENSMUST00000102163 110 ntBASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Gm23251-201ENSMUST00000103773 110 ntBASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Gm14058-201ENSMUST00000116082 735 ntBASIC21.49■■□□□ 1.03
Trim41Q5NCC3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Gm9132-201ENSMUST00000210182 832 ntBASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim41Q5NCC3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 AC153961.1-201ENSMUST00000217760 385 ntBASIC21.48■■□□□ 1.03
Trim41Q5NCC3 CT030135.2-201ENSMUST00000225255 893 ntBASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Gm6210-201ENSMUST00000204734 1942 ntBASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Gm43045-201ENSMUST00000198725 2095 ntBASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim41Q5NCC3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Gm22133-201ENSMUST00000102082 109 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Gm15881-201ENSMUST00000148792 942 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Gm37246-201ENSMUST00000192665 835 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Gm35713-201ENSMUST00000210516 199 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Gm4797-201ENSMUST00000219075 1283 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Gm1821-202ENSMUST00000227415 750 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim41Q5NCC3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms