Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm6458-201ENSMUST00000211573 635 ntBASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm26315-201ENSMUST00000083890 321 ntBASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim9Q3V0X1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim9Q3V0X1 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm11978-201ENSMUST00000122315 466 ntBASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm10253-201ENSMUST00000194270 940 ntBASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm43094-201ENSMUST00000196549 921 ntBASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim9Q3V0X1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim9Q3V0X1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smim9Q3V0X1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms