Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cnga4Q3UW12 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm16296-201ENSMUST00000159905 325 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cnga4Q3UW12 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cnga4Q3UW12 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cnga4Q3UW12 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cnga4Q3UW12 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cnga4Q3UW12 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms