Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fam196aQ3USH1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm25063-201ENSMUST00000104666 94 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm13263-201ENSMUST00000121271 838 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm18059-201ENSMUST00000208073 580 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm45594-201ENSMUST00000211717 241 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm3619-201ENSMUST00000219947 775 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.44□□□□□ -0.42
Fam196aQ3USH1 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm15703-201ENSMUST00000120250 880 ntBASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm5100-201ENSMUST00000195631 589 ntBASIC12.43□□□□□ -0.42
Fam196aQ3USH1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.43□□□□□ -0.42
Fam196aQ3USH1 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Fam196aQ3USH1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fam196aQ3USH1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms