Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm37246-201ENSMUST00000192665 835 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Gm44551-201ENSMUST00000208804 171 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Gm10179-201ENSMUST00000086233 688 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upf3aQ3ULJ3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm12208-201ENSMUST00000122004 163 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm23085-201ENSMUST00000157849 293 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm8343-201ENSMUST00000182705 994 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm27438-201ENSMUST00000183480 110 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upf3aQ3ULJ3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm15782-201ENSMUST00000121073 445 ntBASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Rprl1-201ENSMUST00000158050 327 ntBASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm4157-201ENSMUST00000211647 679 ntBASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Ginm1-202ENSMUST00000065124 300 ntBASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Upf3aQ3ULJ3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms