Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm12502-201ENSMUST00000120197 444 ntBASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm13316-201ENSMUST00000140537 691 ntBASIC14.57□□□□□ -0.08
Limch1Q3UH68 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.57□□□□□ -0.08
Limch1Q3UH68 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Matn2-203ENSMUST00000226766 3252 ntBASIC14.57□□□□□ -0.08
Limch1Q3UH68 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Gm14726-201ENSMUST00000120623 896 ntBASIC14.56□□□□□ -0.08
Limch1Q3UH68 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Gm5363-201ENSMUST00000211927 938 ntBASIC14.56□□□□□ -0.08
Limch1Q3UH68 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.56□□□□□ -0.08
Limch1Q3UH68 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.56□□□□□ -0.08
Limch1Q3UH68 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Limch1Q3UH68 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Daam2-202ENSMUST00000224595 1926 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm9022-201ENSMUST00000182482 992 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm18753-201ENSMUST00000201000 566 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.55□□□□□ -0.08
Limch1Q3UH68 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Limch1Q3UH68 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms