Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm15746-201ENSMUST00000120684 1027 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm11993-201ENSMUST00000121861 820 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm38103-201ENSMUST00000191707 864 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm43163-201ENSMUST00000196571 442 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 AC137871.1-201ENSMUST00000228278 475 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm11244-201ENSMUST00000121243 237 ntBASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm44814-201ENSMUST00000207018 434 ntBASIC14.34□□□□□ -0.11
Rnf180Q3U827 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.34□□□□□ -0.11
Rnf180Q3U827 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf180Q3U827 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rnf180Q3U827 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf180Q3U827 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf180Q3U827 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf180Q3U827 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf180Q3U827 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf180Q3U827 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm23439-201ENSMUST00000104292 132 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm13827-201ENSMUST00000148801 372 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm17944-201ENSMUST00000186351 643 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm8226-201ENSMUST00000190511 798 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnf180Q3U827 Gm38151-201ENSMUST00000195085 289 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 AC154477.1-201ENSMUST00000226515 773 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 AC137842.2-201ENSMUST00000227734 797 ntBASIC14.33□□□□□ -0.12
Rnf180Q3U827 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms