Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Gm11618-201ENSMUST00000117946 267 ntBASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Gm28693-202ENSMUST00000190758 331 ntBASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Gm10012-201ENSMUST00000078252 192 ntBASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Fndc4Q3TR08 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.56□□□□□ -0.72
Fndc4Q3TR08 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm11803-201ENSMUST00000119966 444 ntBASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Fndc4Q3TR08 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Fndc4Q3TR08 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.55□□□□□ -0.72
Fndc4Q3TR08 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms