Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm24934-201ENSMUST00000103764 111 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm13297-201ENSMUST00000120205 934 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm27501-201ENSMUST00000183599 107 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm29396-201ENSMUST00000185659 716 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Gm42627-201ENSMUST00000197347 224 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ctdnep1Q3TP92 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Gm15370-201ENSMUST00000117158 253 ntBASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Gm14127-201ENSMUST00000117906 678 ntBASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdnep1Q3TP92 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Gm12742-201ENSMUST00000117326 410 ntBASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Gm10478-201ENSMUST00000084451 396 ntBASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdnep1Q3TP92 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms