Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Gm11619-201ENSMUST00000117474 237 ntBASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Gm22146-201ENSMUST00000157397 288 ntBASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Gm29763-201ENSMUST00000205306 616 ntBASIC17.14■□□□□ 0.33
Trpm1Q2TV84 AC158388.3-202ENSMUST00000225517 775 ntBASIC17.14■□□□□ 0.33
Trpm1Q2TV84 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm1Q2TV84 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Gm11560-201ENSMUST00000117567 948 ntBASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Gm37852-201ENSMUST00000193027 350 ntBASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm1Q2TV84 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Gm25604-201ENSMUST00000158359 133 ntBASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 AC158392.3-201ENSMUST00000224271 1284 ntBASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trpm1Q2TV84 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Gm14270-201ENSMUST00000118388 846 ntBASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Gm22379-201ENSMUST00000157480 131 ntBASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Matn2-206ENSMUST00000228570 2798 ntBASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trpm1Q2TV84 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms