Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm15429-201ENSMUST00000151268 798 ntBASIC10.98□□□□□ -0.65
Rab42Q0PD08 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm19184-201ENSMUST00000196798 928 ntBASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm19931-201ENSMUST00000198920 368 ntBASIC10.98□□□□□ -0.65
Rab42Q0PD08 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm45668-201ENSMUST00000211271 493 ntBASIC10.98□□□□□ -0.65
Rab42Q0PD08 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.98□□□□□ -0.65
Rab42Q0PD08 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.98□□□□□ -0.65
Rab42Q0PD08 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rab42Q0PD08 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.97□□□□□ -0.65
Rab42Q0PD08 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.97□□□□□ -0.65
Rab42Q0PD08 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.97□□□□□ -0.65
Rab42Q0PD08 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.97□□□□□ -0.65
Rab42Q0PD08 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rab42Q0PD08 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms