Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm18367-201ENSMUST00000176139 600 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm6755-201ENSMUST00000100598 864 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm6740-201ENSMUST00000100617 864 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm14227-201ENSMUST00000119431 629 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm18304-201ENSMUST00000189162 546 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.03□□□□□ -0.64
Chd8Q09XV5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd8Q09XV5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd8Q09XV5 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm13039-201ENSMUST00000118638 794 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm26313-201ENSMUST00000157770 308 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm7082-201ENSMUST00000209880 969 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm12072-201ENSMUST00000118293 715 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm16441-201ENSMUST00000138176 924 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm26670-202ENSMUST00000226862 340 ntBASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd8Q09XV5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Chd8Q09XV5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Gm23129-201ENSMUST00000104259 132 ntBASIC11.01□□□□□ -0.65
Chd8Q09XV5 Gm8019-201ENSMUST00000119317 587 ntBASIC11.01□□□□□ -0.65
Chd8Q09XV5 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.01□□□□□ -0.65
Chd8Q09XV5 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd8Q09XV5 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms