Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Gm8018-201ENSMUST00000173536 789 ntBASIC12.45□□□□□ -0.42
Pfdn6Q03958 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Gm43433-201ENSMUST00000196573 481 ntBASIC12.45□□□□□ -0.42
Pfdn6Q03958 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.45□□□□□ -0.42
Pfdn6Q03958 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pfdn6Q03958 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm13226-201ENSMUST00000117838 404 ntBASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm13829-201ENSMUST00000119600 138 ntBASIC12.44□□□□□ -0.42
Pfdn6Q03958 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm14760-201ENSMUST00000121831 999 ntBASIC12.44□□□□□ -0.42
Pfdn6Q03958 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm44405-201ENSMUST00000198952 126 ntBASIC12.44□□□□□ -0.42
Pfdn6Q03958 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.44□□□□□ -0.42
Pfdn6Q03958 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn6Q03958 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.43□□□□□ -0.42
Pfdn6Q03958 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn6Q03958 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms