Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.31□□□□□ -0.6
Scn1bP97952 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.31□□□□□ -0.6
Scn1bP97952 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.31□□□□□ -0.6
Scn1bP97952 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.31□□□□□ -0.6
Scn1bP97952 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Scn1bP97952 Gm9797-201ENSMUST00000052902 613 ntBASIC11.31□□□□□ -0.6
Scn1bP97952 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.31□□□□□ -0.6
Scn1bP97952 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.31□□□□□ -0.6
Scn1bP97952 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.31□□□□□ -0.6
Scn1bP97952 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scn1bP97952 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Scn1bP97952 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.3□□□□□ -0.6
Scn1bP97952 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Scn1bP97952 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.3□□□□□ -0.6
Scn1bP97952 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Gm12485-201ENSMUST00000119641 291 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.3□□□□□ -0.6
Scn1bP97952 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.3□□□□□ -0.6
Scn1bP97952 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Scn1bP97952 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Gm27838-201ENSMUST00000184829 128 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 Gm29667-201ENSMUST00000190817 490 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.3□□□□□ -0.6
Scn1bP97952 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Scn1bP97952 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Scn1bP97952 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scn1bP97952 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.3□□□□□ -0.6
Scn1bP97952 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Scn1bP97952 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Scn1bP97952 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.29□□□□□ -0.6
Scn1bP97952 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Scn1bP97952 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm10576-201ENSMUST00000191927 825 ntBASIC11.29□□□□□ -0.6
Scn1bP97952 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms