Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC8.13□□□□□ -1.11
PrkdcP97313 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm6423-201ENSMUST00000204315 934 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC8.13□□□□□ -1.11
PrkdcP97313 Zkscan3-207ENSMUST00000223831 2101 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 AC129931.1-201ENSMUST00000228865 1861 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm24933-201ENSMUST00000103762 110 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Gm23252-201ENSMUST00000103776 110 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm26443-201ENSMUST00000179610 110 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Gm44711-201ENSMUST00000205414 1264 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 AC118639.2-201ENSMUST00000226289 223 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PrkdcP97313 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PrkdcP97313 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PrkdcP97313 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC8.13□□□□□ -1.11
PrkdcP97313 Gm6216-201ENSMUST00000182390 687 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Mir6359-201ENSMUST00000183668 81 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Gm43866-201ENSMUST00000203894 839 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC8.13□□□□□ -1.11
PrkdcP97313 AC164437.3-201ENSMUST00000228323 347 ntBASIC8.13□□□□□ -1.11
PrkdcP97313 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PrkdcP97313 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PrkdcP97313 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 AC137842.1-201ENSMUST00000227896 2064 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PrkdcP97313 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PrkdcP97313 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm16209-201ENSMUST00000118457 627 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Gm15373-201ENSMUST00000121495 214 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Gm10171-201ENSMUST00000126220 628 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Cd9-ps-201ENSMUST00000174687 650 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC8.12□□□□□ -1.11
PrkdcP97313 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm10233-201ENSMUST00000089275 628 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 AC166491.1-201ENSMUST00000227053 2308 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm8226-201ENSMUST00000190511 798 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
PrkdcP97313 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm8255-201ENSMUST00000218693 305 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 AC174797.2-201ENSMUST00000225835 165 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 AC154477.1-201ENSMUST00000226515 773 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 AC137842.2-201ENSMUST00000227734 797 ntBASIC8.12□□□□□ -1.11
PrkdcP97313 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PrkdcP97313 Gm4978-201ENSMUST00000071565 801 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms