Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm27243-201ENSMUST00000183964 521 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm44882-201ENSMUST00000205702 802 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm5904-201ENSMUST00000210286 865 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm7653-201ENSMUST00000214567 508 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.65□□□□□ -0.22
Hmgb1P63158 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hmgb1P63158 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgb1P63158 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.65□□□□□ -0.23
Hmgb1P63158 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Hmgb1P63158 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hmgb1P63158 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.64□□□□□ -0.23
Hmgb1P63158 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm12502-201ENSMUST00000120197 444 ntBASIC13.64□□□□□ -0.23
Hmgb1P63158 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm6007-201ENSMUST00000208170 823 ntBASIC13.64□□□□□ -0.23
Hmgb1P63158 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Hmgb1P63158 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgb1P63158 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgb1P63158 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Gm11597-201ENSMUST00000121423 964 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.63□□□□□ -0.23
Hmgb1P63158 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgb1P63158 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms