Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Crnkl1P63154 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm12490-201ENSMUST00000120255 560 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm26464-201ENSMUST00000157094 305 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.26□□□□□ -0.45
Crnkl1P63154 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Crnkl1P63154 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.26□□□□□ -0.45
Crnkl1P63154 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crnkl1P63154 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.25□□□□□ -0.45
Crnkl1P63154 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Mir7654-201ENSMUST00000185082 70 ntBASIC12.25□□□□□ -0.45
Crnkl1P63154 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Crnkl1P63154 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crnkl1P63154 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Crnkl1P63154 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm15371-201ENSMUST00000117057 784 ntBASIC12.24□□□□□ -0.45
Crnkl1P63154 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm15376-201ENSMUST00000122258 783 ntBASIC12.24□□□□□ -0.45
Crnkl1P63154 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms