Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx1P63006 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx1P63006 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lhx1P63006 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx1P63006 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx1P63006 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Lhx1P63006 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.17□□□□□ -0.46
Lhx1P63006 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lhx1P63006 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx1P63006 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lhx1P63006 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx1P63006 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Gm23912-201ENSMUST00000104687 87 ntBASIC12.16□□□□□ -0.46
Lhx1P63006 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.16□□□□□ -0.46
Lhx1P63006 Gm13996-201ENSMUST00000118456 430 ntBASIC12.16□□□□□ -0.46
Lhx1P63006 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.16□□□□□ -0.46
Lhx1P63006 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.16□□□□□ -0.46
Lhx1P63006 Gm44882-201ENSMUST00000205702 802 ntBASIC12.16□□□□□ -0.46
Lhx1P63006 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.16□□□□□ -0.46
Lhx1P63006 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lhx1P63006 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Lhx1P63006 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx1P63006 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx1P63006 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lhx1P63006 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Lhx1P63006 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.15□□□□□ -0.46
Lhx1P63006 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.15□□□□□ -0.46
Lhx1P63006 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.15□□□□□ -0.46
Lhx1P63006 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.15□□□□□ -0.46
Lhx1P63006 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.15□□□□□ -0.46
Lhx1P63006 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.15□□□□□ -0.46
Lhx1P63006 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.15□□□□□ -0.46
Lhx1P63006 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lhx1P63006 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx1P63006 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx1P63006 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Lhx1P63006 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lhx1P63006 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms