Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ybx1P62960 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.67□□□□□ -0.38
Ybx1P62960 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.67□□□□□ -0.38
Ybx1P62960 Gm24231-201ENSMUST00000104315 133 ntBASIC12.67□□□□□ -0.38
Ybx1P62960 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm14058-201ENSMUST00000116082 735 ntBASIC12.67□□□□□ -0.38
Ybx1P62960 Gm12165-201ENSMUST00000117047 342 ntBASIC12.67□□□□□ -0.38
Ybx1P62960 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.67□□□□□ -0.38
Ybx1P62960 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ybx1P62960 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ybx1P62960 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ybx1P62960 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ybx1P62960 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ybx1P62960 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Gm24934-201ENSMUST00000103764 111 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ybx1P62960 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Gm15432-201ENSMUST00000121106 195 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Gm10051-201ENSMUST00000145209 414 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ybx1P62960 Gm27530-201ENSMUST00000184096 98 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ybx1P62960 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ybx1P62960 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.66□□□□□ -0.38
Ybx1P62960 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.66□□□□□ -0.38
Ybx1P62960 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ybx1P62960 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ybx1P62960 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ybx1P62960 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Ybx1P62960 Gm13035-201ENSMUST00000117496 342 ntBASIC12.65□□□□□ -0.38
Ybx1P62960 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Gm19459-201ENSMUST00000176240 835 ntBASIC12.65□□□□□ -0.38
Ybx1P62960 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.65□□□□□ -0.38
Ybx1P62960 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms