Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Lsm6P62313 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.88□□□□□ -0.67
Lsm6P62313 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lsm6P62313 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Lsm6P62313 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Lsm6P62313 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lsm6P62313 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Lsm6P62313 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.87□□□□□ -0.67
Lsm6P62313 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lsm6P62313 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.87□□□□□ -0.67
Lsm6P62313 Gm9083-201ENSMUST00000120423 819 ntBASIC10.87□□□□□ -0.67
Lsm6P62313 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Lsm6P62313 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.87□□□□□ -0.67
Lsm6P62313 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lsm6P62313 Gm42599-201ENSMUST00000201308 469 ntBASIC10.87□□□□□ -0.67
Lsm6P62313 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.87□□□□□ -0.67
Lsm6P62313 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Lsm6P62313 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lsm6P62313 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.87□□□□□ -0.67
Lsm6P62313 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.87□□□□□ -0.67
Lsm6P62313 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.87□□□□□ -0.67
Lsm6P62313 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lsm6P62313 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lsm6P62313 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.86□□□□□ -0.67
Lsm6P62313 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Gm6023-201ENSMUST00000118217 606 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lsm6P62313 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lsm6P62313 Gm37201-201ENSMUST00000191845 523 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 Gm18062-201ENSMUST00000208020 547 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 Gm18055-201ENSMUST00000208254 547 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.86□□□□□ -0.67
Lsm6P62313 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.86□□□□□ -0.67
Lsm6P62313 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms