Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11□□□□□ -0.65
Sf3b6P59708 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sf3b6P59708 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm12138-201ENSMUST00000122180 951 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm17794-201ENSMUST00000220252 955 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm18473-201ENSMUST00000220543 868 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.99□□□□□ -0.65
Sf3b6P59708 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sf3b6P59708 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sf3b6P59708 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.98□□□□□ -0.65
Sf3b6P59708 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sf3b6P59708 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sf3b6P59708 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sf3b6P59708 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm5186-201ENSMUST00000218781 920 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm24136-201ENSMUST00000083374 165 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm5356-201ENSMUST00000093326 615 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.98□□□□□ -0.65
Sf3b6P59708 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.98□□□□□ -0.65
Sf3b6P59708 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sf3b6P59708 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sf3b6P59708 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.97□□□□□ -0.65
Sf3b6P59708 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.97□□□□□ -0.65
Sf3b6P59708 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sf3b6P59708 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sf3b6P59708 Gm8805-201ENSMUST00000117848 313 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms