Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.7□□□□□ -0.54
Nup43P59235 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup43P59235 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Nup43P59235 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gm14726-201ENSMUST00000120623 896 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Nup43P59235 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.69□□□□□ -0.54
Nup43P59235 Gm31256-201ENSMUST00000194705 506 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Gm38341-201ENSMUST00000195357 515 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Gm42937-201ENSMUST00000197360 752 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.69□□□□□ -0.54
Nup43P59235 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.69□□□□□ -0.54
Nup43P59235 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nup43P59235 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nup43P59235 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.68□□□□□ -0.54
Nup43P59235 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nup43P59235 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nup43P59235 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.68□□□□□ -0.54
Nup43P59235 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.68□□□□□ -0.54
Nup43P59235 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.68□□□□□ -0.54
Nup43P59235 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Nup43P59235 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nup43P59235 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nup43P59235 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.68□□□□□ -0.54
Nup43P59235 Gm44124-201ENSMUST00000204159 472 ntBASIC11.68□□□□□ -0.54
Nup43P59235 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.68□□□□□ -0.54
Nup43P59235 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nup43P59235 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.68□□□□□ -0.54
Nup43P59235 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nup43P59235 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.68□□□□□ -0.54
Nup43P59235 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms