Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm13624-201ENSMUST00000120263 462 ntBASIC12.97□□□□□ -0.33
NcanP55066 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.97□□□□□ -0.33
NcanP55066 Gm24844-201ENSMUST00000158679 127 ntBASIC12.97□□□□□ -0.33
NcanP55066 Gm8815-201ENSMUST00000173809 620 ntBASIC12.97□□□□□ -0.33
NcanP55066 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NcanP55066 Gm29304-201ENSMUST00000186555 695 ntBASIC12.97□□□□□ -0.33
NcanP55066 Gm29223-201ENSMUST00000188867 695 ntBASIC12.97□□□□□ -0.33
NcanP55066 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Gm37921-201ENSMUST00000194333 695 ntBASIC12.97□□□□□ -0.33
NcanP55066 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NcanP55066 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.97□□□□□ -0.33
NcanP55066 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Gm23680-201ENSMUST00000083162 164 ntBASIC12.97□□□□□ -0.33
NcanP55066 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.97□□□□□ -0.33
NcanP55066 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
NcanP55066 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.97□□□□□ -0.33
NcanP55066 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NcanP55066 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.97□□□□□ -0.33
NcanP55066 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.96□□□□□ -0.33
NcanP55066 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.96□□□□□ -0.33
NcanP55066 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.96□□□□□ -0.33
NcanP55066 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.96□□□□□ -0.33
NcanP55066 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NcanP55066 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.96□□□□□ -0.33
NcanP55066 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NcanP55066 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.96□□□□□ -0.33
NcanP55066 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.96□□□□□ -0.33
NcanP55066 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.96□□□□□ -0.33
NcanP55066 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NcanP55066 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.96□□□□□ -0.33
NcanP55066 Gm29499-201ENSMUST00000189151 486 ntBASIC12.96□□□□□ -0.33
NcanP55066 Gm28329-201ENSMUST00000191208 689 ntBASIC12.96□□□□□ -0.33
NcanP55066 Gm29171-201ENSMUST00000191397 486 ntBASIC12.96□□□□□ -0.33
NcanP55066 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.96□□□□□ -0.33
NcanP55066 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.96□□□□□ -0.33
NcanP55066 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.96□□□□□ -0.33
NcanP55066 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.96□□□□□ -0.33
NcanP55066 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NcanP55066 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.96□□□□□ -0.33
NcanP55066 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NcanP55066 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.95□□□□□ -0.34
NcanP55066 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NcanP55066 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NcanP55066 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms