Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Sox1P53783 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox1P53783 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Gm22594-201ENSMUST00000104251 130 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.63□□□□□ -0.39
Sox1P53783 Gm11619-201ENSMUST00000117474 237 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Gm12712-201ENSMUST00000120676 801 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox1P53783 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox1P53783 Gm23675-201ENSMUST00000157311 125 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.63□□□□□ -0.39
Sox1P53783 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Sox1P53783 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Gm8343-201ENSMUST00000182705 994 ntBASIC12.63□□□□□ -0.39
Sox1P53783 BC106175-202ENSMUST00000219344 1213 ntBASIC12.63□□□□□ -0.39
Sox1P53783 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Gm23680-201ENSMUST00000083162 164 ntBASIC12.63□□□□□ -0.39
Sox1P53783 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sox1P53783 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox1P53783 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.63□□□□□ -0.39
Sox1P53783 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Sox1P53783 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox1P53783 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox1P53783 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.62□□□□□ -0.39
Sox1P53783 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox1P53783 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Sox1P53783 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox1P53783 Gm22920-201ENSMUST00000102175 109 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox1P53783 Gm14213-201ENSMUST00000119778 768 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox1P53783 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.62□□□□□ -0.39
Sox1P53783 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox1P53783 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox1P53783 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox1P53783 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox1P53783 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox1P53783 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Gm18514-201ENSMUST00000218980 436 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Gm18968-201ENSMUST00000221319 862 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox1P53783 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.62□□□□□ -0.39
Sox1P53783 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox1P53783 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox1P53783 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox1P53783 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox1P53783 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Gm12337-201ENSMUST00000119634 400 ntBASIC12.61□□□□□ -0.39
Sox1P53783 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox1P53783 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms