Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Pdx1P52946 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdx1P52946 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pdx1P52946 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pdx1P52946 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pdx1P52946 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pdx1P52946 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdx1P52946 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdx1P52946 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.23□□□□□ -0.45
Pdx1P52946 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Gm14723-201ENSMUST00000118686 215 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Gm14832-201ENSMUST00000121289 322 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.23□□□□□ -0.45
Pdx1P52946 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Gm26956-201ENSMUST00000182176 986 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Gm43179-201ENSMUST00000198797 275 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Gm44958-201ENSMUST00000203734 736 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.23□□□□□ -0.45
Pdx1P52946 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.23□□□□□ -0.45
Pdx1P52946 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Pdx1P52946 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdx1P52946 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.22□□□□□ -0.45
Pdx1P52946 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.22□□□□□ -0.45
Pdx1P52946 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.22□□□□□ -0.45
Pdx1P52946 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Gm38266-201ENSMUST00000194931 421 ntBASIC12.22□□□□□ -0.45
Pdx1P52946 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Gm43758-201ENSMUST00000199500 367 ntBASIC12.22□□□□□ -0.45
Pdx1P52946 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pdx1P52946 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pdx1P52946 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.22□□□□□ -0.45
Pdx1P52946 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Pdx1P52946 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdx1P52946 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.21□□□□□ -0.45
Pdx1P52946 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdx1P52946 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pdx1P52946 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.21□□□□□ -0.45
Pdx1P52946 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.21□□□□□ -0.45
Pdx1P52946 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdx1P52946 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdx1P52946 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pdx1P52946 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pdx1P52946 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pdx1P52946 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdx1P52946 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms