Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.02□□□□□ -0.33
SftpdP50404 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SftpdP50404 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
SftpdP50404 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.02□□□□□ -0.33
SftpdP50404 Mir8109-201ENSMUST00000184375 117 ntBASIC13.02□□□□□ -0.33
SftpdP50404 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.02□□□□□ -0.33
SftpdP50404 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.02□□□□□ -0.33
SftpdP50404 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Gm30285-201ENSMUST00000214614 422 ntBASIC13.02□□□□□ -0.33
SftpdP50404 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.02□□□□□ -0.33
SftpdP50404 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SftpdP50404 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.02□□□□□ -0.33
SftpdP50404 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SftpdP50404 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SftpdP50404 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SftpdP50404 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.01□□□□□ -0.33
SftpdP50404 Gm11222-201ENSMUST00000119005 738 ntBASIC13.01□□□□□ -0.33
SftpdP50404 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.01□□□□□ -0.33
SftpdP50404 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SftpdP50404 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.01□□□□□ -0.33
SftpdP50404 Gm38266-201ENSMUST00000194931 421 ntBASIC13.01□□□□□ -0.33
SftpdP50404 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.01□□□□□ -0.33
SftpdP50404 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.01□□□□□ -0.33
SftpdP50404 Cts7-204ENSMUST00000225321 1257 ntBASIC13.01□□□□□ -0.33
SftpdP50404 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.01□□□□□ -0.33
SftpdP50404 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SftpdP50404 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SftpdP50404 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.01□□□□□ -0.33
SftpdP50404 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SftpdP50404 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SftpdP50404 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Gm7224-201ENSMUST00000121359 2066 ntBASIC13□□□□□ -0.33
SftpdP50404 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SftpdP50404 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SftpdP50404 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Gm13142-201ENSMUST00000117213 1453 ntBASIC13□□□□□ -0.33
SftpdP50404 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Gm4864-201ENSMUST00000219894 1461 ntBASIC13□□□□□ -0.33
SftpdP50404 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Gm24934-201ENSMUST00000103764 111 ntBASIC13□□□□□ -0.33
SftpdP50404 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Gm14832-201ENSMUST00000121289 322 ntBASIC13□□□□□ -0.33
SftpdP50404 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Gm24845-201ENSMUST00000158034 109 ntBASIC13□□□□□ -0.33
SftpdP50404 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13□□□□□ -0.33
SftpdP50404 AC159896.2-201ENSMUST00000214753 269 ntBASIC13□□□□□ -0.33
SftpdP50404 AC154319.1-201ENSMUST00000216330 312 ntBASIC13□□□□□ -0.33
SftpdP50404 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13□□□□□ -0.33
SftpdP50404 AL589735.1-201ENSMUST00000224353 270 ntBASIC13□□□□□ -0.33
SftpdP50404 AC113031.8-201ENSMUST00000227856 631 ntBASIC13□□□□□ -0.33
SftpdP50404 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms