Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hnf4aP49698 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hnf4aP49698 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12□□□□□ -0.49
Hnf4aP49698 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12□□□□□ -0.49
Hnf4aP49698 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Gm2238-201ENSMUST00000192074 3669 ntBASIC12□□□□□ -0.49
Hnf4aP49698 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Gm5053-201ENSMUST00000208361 1678 ntBASIC12□□□□□ -0.49
Hnf4aP49698 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hnf4aP49698 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.99□□□□□ -0.49
Hnf4aP49698 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Hnf4aP49698 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hnf4aP49698 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Hnf4aP49698 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Gm14127-201ENSMUST00000117906 678 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Gm12314-201ENSMUST00000118104 538 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Gm13736-201ENSMUST00000119272 253 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Snora78-201ENSMUST00000158630 128 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Gm27514-201ENSMUST00000183692 110 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.98□□□□□ -0.49
Hnf4aP49698 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hnf4aP49698 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hnf4aP49698 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms