Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.9□□□□□ -0.5
Prox1P48437 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.9□□□□□ -0.5
Prox1P48437 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.9□□□□□ -0.5
Prox1P48437 Gm18473-201ENSMUST00000220543 868 ntBASIC11.9□□□□□ -0.5
Prox1P48437 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Prox1P48437 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.9□□□□□ -0.5
Prox1P48437 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Prox1P48437 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Prox1P48437 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.9□□□□□ -0.5
Prox1P48437 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Prox1P48437 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Prox1P48437 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Prox1P48437 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Prox1P48437 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Prox1P48437 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Prox1P48437 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Prox1P48437 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.89□□□□□ -0.51
Prox1P48437 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Cog3-203ENSMUST00000227473 4197 ntBASIC11.89□□□□□ -0.51
Prox1P48437 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Prox1P48437 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Prox1P48437 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Prox1P48437 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.89□□□□□ -0.51
Prox1P48437 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.89□□□□□ -0.51
Prox1P48437 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.89□□□□□ -0.51
Prox1P48437 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Prox1P48437 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.89□□□□□ -0.51
Prox1P48437 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.89□□□□□ -0.51
Prox1P48437 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.89□□□□□ -0.51
Prox1P48437 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.89□□□□□ -0.51
Prox1P48437 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.89□□□□□ -0.51
Prox1P48437 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.89□□□□□ -0.51
Prox1P48437 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Prox1P48437 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.89□□□□□ -0.51
Prox1P48437 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Prox1P48437 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Gm12291-201ENSMUST00000121627 311 ntBASIC11.88□□□□□ -0.51
Prox1P48437 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Prox1P48437 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Gm12091-201ENSMUST00000146791 830 ntBASIC11.88□□□□□ -0.51
Prox1P48437 Gm23984-201ENSMUST00000157139 203 ntBASIC11.88□□□□□ -0.51
Prox1P48437 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Prox1P48437 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Prox1P48437 Gm28693-202ENSMUST00000190758 331 ntBASIC11.88□□□□□ -0.51
Prox1P48437 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms