Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.1□□□□□ -0.47
Gli1P47806 Gm43118-201ENSMUST00000199149 775 ntBASIC12.1□□□□□ -0.47
Gli1P47806 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.1□□□□□ -0.47
Gli1P47806 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.1□□□□□ -0.47
Gli1P47806 Gm9368-201ENSMUST00000219348 831 ntBASIC12.1□□□□□ -0.47
Gli1P47806 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gli1P47806 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gli1P47806 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gli1P47806 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.1□□□□□ -0.47
Gli1P47806 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gli1P47806 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gli1P47806 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.1□□□□□ -0.47
Gli1P47806 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.1□□□□□ -0.47
Gli1P47806 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gli1P47806 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gli1P47806 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gli1P47806 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.09□□□□□ -0.47
Gli1P47806 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.09□□□□□ -0.47
Gli1P47806 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.09□□□□□ -0.47
Gli1P47806 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gli1P47806 Gm5687-201ENSMUST00000118252 640 ntBASIC12.09□□□□□ -0.47
Gli1P47806 Gm15808-201ENSMUST00000119046 604 ntBASIC12.09□□□□□ -0.47
Gli1P47806 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.09□□□□□ -0.47
Gli1P47806 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.09□□□□□ -0.47
Gli1P47806 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gli1P47806 Gm26035-201ENSMUST00000083065 308 ntBASIC12.09□□□□□ -0.47
Gli1P47806 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gli1P47806 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Gli1P47806 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gli1P47806 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gli1P47806 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.09□□□□□ -0.47
Gli1P47806 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gli1P47806 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Gli1P47806 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Gli1P47806 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gli1P47806 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gli1P47806 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gli1P47806 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gli1P47806 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gli1P47806 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Mir877-201ENSMUST00000104738 85 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Gli1P47806 Gm26083-201ENSMUST00000157904 193 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Gm38341-201ENSMUST00000195357 515 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.08□□□□□ -0.48
Gli1P47806 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.08□□□□□ -0.48
Gli1P47806 Gm43133-201ENSMUST00000197472 463 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Gm43758-201ENSMUST00000199500 367 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.08□□□□□ -0.48
Gli1P47806 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Cts7-204ENSMUST00000225321 1257 ntBASIC12.08□□□□□ -0.48
Gli1P47806 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gli1P47806 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms