Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.56□□□□□ -0.4
Vps4bP46467 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.56□□□□□ -0.4
Vps4bP46467 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm43818-201ENSMUST00000200605 466 ntBASIC12.56□□□□□ -0.4
Vps4bP46467 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.56□□□□□ -0.4
Vps4bP46467 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm45930-201ENSMUST00000221330 292 ntBASIC12.56□□□□□ -0.4
Vps4bP46467 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.56□□□□□ -0.4
Vps4bP46467 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps4bP46467 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps4bP46467 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps4bP46467 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps4bP46467 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.56□□□□□ -0.4
Vps4bP46467 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.56□□□□□ -0.4
Vps4bP46467 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.56□□□□□ -0.4
Vps4bP46467 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps4bP46467 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps4bP46467 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps4bP46467 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Vps4bP46467 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps4bP46467 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps4bP46467 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vps4bP46467 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm1335-201ENSMUST00000121653 386 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm8018-201ENSMUST00000173536 789 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 Gm9022-201ENSMUST00000182482 992 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm5904-201ENSMUST00000210286 865 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.55□□□□□ -0.4
Vps4bP46467 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vps4bP46467 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Vps4bP46467 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Vps4bP46467 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vps4bP46467 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Vps4bP46467 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms