Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdx2P43241 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Gm45398-201ENSMUST00000210561 165 ntBASIC11.75□□□□□ -0.53
Cdx2P43241 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdx2P43241 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdx2P43241 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.75□□□□□ -0.53
Cdx2P43241 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.75□□□□□ -0.53
Cdx2P43241 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdx2P43241 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.75□□□□□ -0.53
Cdx2P43241 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdx2P43241 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdx2P43241 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdx2P43241 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
Cdx2P43241 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdx2P43241 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdx2P43241 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Rprl1-201ENSMUST00000158050 327 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Gm28686-201ENSMUST00000187404 609 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.74□□□□□ -0.53
Cdx2P43241 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.74□□□□□ -0.53
Cdx2P43241 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cdx2P43241 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdx2P43241 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx2P43241 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdx2P43241 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdx2P43241 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdx2P43241 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdx2P43241 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdx2P43241 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdx2P43241 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdx2P43241 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.73□□□□□ -0.53
Cdx2P43241 Gm16397-201ENSMUST00000122201 494 ntBASIC11.73□□□□□ -0.53
Cdx2P43241 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.73□□□□□ -0.53
Cdx2P43241 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx2P43241 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Cdx2P43241 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms